Statistics of selected table entries:

Table	Amount of data
Organisms	15
Metabolomics experiment series	17
Proteomics experiment series	2
Transcriptomics experiment series	0
Pathways	147
Metabolic reactions	7567
Transcription factor - gene interactions	213
Proteins	80933
Enzymes	23594
Genes	80933
Compounds	26064

Brief statistics of the enzyme annotation (metabolic network reconstruction) of various Pseudomonas species in SYSTOMONAS. Most enzyme information is provided by KEGG. Further enzyme annotation was retrieved by comparative genomics (predicted, see section 'Comparative genomics'). PGD2, BioCyc, ENZYME also contributed to the functional annotation of enzymes. Some enzyme annotation by the databases is overlapping, so that the enzyme of all resources does not sum up necessarily. Please note, that newly predicted enzymes count all proteins, to which new EC numbers could be assigned, and that the numbers listed here do not add to the total number of enzymes.

Organism - Pseudomonads	Proteins	Enzymes in total	via KEGG	via PDGv2	via ENZYME	via BioCyc	via Genome Reviews	via GenBank	predicted by BLAST	predicted by metaSHARK
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1)	5669	1749	1083	1055	506	740	682	476	452	152
Pseudomonas aeruginosa (strain PA7)	6286	1737	621	0	192	0	765	592	1095	396
Pseudomonas aeruginosa (strain UCBPP-PA14)	5978	1747	998	1133	216	0	405	477	638	189
Pseudomonas entomophila (strain L48)	5166	1570	1104	0	202	0	1150	1092	614	107
Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)	6138	1742	1134	0	226	0	897	0	804	218
Pseudomonas fluorescens (strain PfO-1)	5736	1654	1061	0	235	0	823	827	784	178
Pseudomonas mendocina (strain ymp)	4594	1369	745	0	165	0	788	813	686	213
Pseudomonas putida (strain F1 / ATCC 700007)	5252	1563	810	0	183	0	895	766	820	235
Pseudomonas putida (strain GB-1)	5409	1572	622	0	4	0	4	566	1086	405
Pseudomonas putida (strain KT2440)	5350	1544	649	0	304	0	484	256	758	205
Pseudomonas putida W619	5309	1522	607	0	0	0	0	578	1057	402
Pseudomonas stutzeri (strain A1501)	4128	1217	232	0	146	0	328	391	667	298
Pseudomonas syringae (pathovar phaseolicola, strain 1448A / Race 6)	5169	1513	998	0	229	0	1009	918	607	154
Pseudomonas syringae (pathovar syringae, strain B728a)	5136	1542	945	0	242	0	697	692	729	144
Pseudomonas syringae tomato (strain DC3000)	5613	1553	303	0	302	673	483	0	690	205

SYSTOMONAS 1.0 (26.09.2006)
SYSTOMONAS 1.1 (20.12.2006)
SYSTOMONAS 1.2 (26.05.2007)
SYSTOMONAS 2.0 (29.07.2007)
SYSTOMONAS 2.1 (20.01.2008)
SYSTOMONAS 2.2 (08.05.2008)